Course material for genomic data analysis

The following sections, you will learn to use command line tools for analysis of genomic datasets. You will first need to set up your work environment to follow the instructions. If you are using the ABI server, you may find the material in the respective directory. If you are using a virtual environment you can download the files from the cloud as described below.

On the server

The NGS course materials are also stored on the server in the following directory


The files are separated by the types and assignments.

You need to copy them to your working directory, so you can operate on them.

In the cloud

All materials related to the NGS course are stored in Zenodo, you can download them and upload them to the server.

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