File formats, alignment, and genomic features

This module is based the online Coursera course Command Line Tools for Genomic Data Science offered by Johns Hopkins University. In this module, we will explore the primary data formats used in genomic data analysis and learn how to use command-line tools to process and analyze them.

Course material for genomic data analysis

On the server

The example data materials are stored on our server, we will give a path once you open a user .

The files are organized by type and assignment. You need to copy them to your working directory to begin working with them.

Note: All upcoming file paths will be provided relative to this directory.