ABI Bioinformatics Guide 2024
  • INTRODUCTION
    • How to use the guide
  • MOLECULAR BIOLOGY
    • The Cell
      • Cells and Their Organelles
      • Cell Specialisation
      • Quiz 1
    • Biological Molecules
      • Carbohydrates
      • Lipids
      • Nucleic Acids (DNA and RNA)
      • Quiz 2
      • Proteins
      • Catalysis of Biological Reactions
      • Quiz 3
    • Information Flow in the Cell
      • DNA Replication
      • Gene Expression: Transcription
      • Gene Expression: RNA Processing
      • Quiz 4
      • Chromatin and Chromosomes
      • Regulation of Gene Expression
      • Quiz 5
      • The Genetic Code
      • Gene Expression: Translation
    • Cell Cycle and Cell Division
      • Quiz 6
    • Mutations and Variations
      • Point mutations
      • Genotype-Phenotype Interactions
      • Quiz 7
  • PROGRAMMING
    • Python for Genomics
    • R programming (optional)
  • STATISTICS: THEORY
    • Introduction to Probability
      • Conditional Probability
      • Independent Events
    • Random Variables
      • Independent, Dependent and Controlled Variables
    • Data distribution PMF, PDF, CDF
    • Mean, Variance of a Random Variable
    • Some Common Distributions
    • Exploratory Statistics: Mean, Median, Quantiles, Variance/SD
    • Data Visualization
    • Confidence Intervals
    • Comparison tests, p-value, z-score
    • Multiple test correction: Bonferroni, FDR
    • Regression & Correlation
    • Dimentionality Reduction
      • PCA (Principal Component Analysis)
      • t-SNE (t-Distributed Stochastic Neighbor Embedding)
      • UMAP (Uniform Manifold Approximation and Projection)
    • QUIZ
  • STATISTICS & PROGRAMMING
  • BIOINFORMATICS ALGORITHMS
    • Introduction
    • DNA strings and sequencing file formats
    • Read alignment: exact matching
    • Indexing before alignment
    • Read alignment: approximate matching
    • Global and local alignment
  • NGS DATA ANALYSIS & FUNCTIONAL GENOMICS
    • Experimental Techniques
      • Polymerase Chain Reaction
      • Sanger (first generation) Sequencing Technologies
      • Next (second) Generation Sequencing technologies
      • The third generation of sequencing technologies
    • The Linux Command-line
      • Connecting to the Server
      • The Linux Command-Line For Beginners
      • The Bash Terminal
    • File formats, alignment, and genomic features
      • FASTA & FASTQ file formats
      • Basic Unix Commands for Genomics
      • Sequences and Genomic Features Part 1
      • Sequences and Genomic Features Part 2: SAMtools
      • Sequences and Genomic Features Part 3: BEDtools
    • Genetic variations & variant calling
      • Genomic Variations
      • Alignment and variant detection: Practical
      • Integrative Genomics Viewer
      • Variant Calling with GATK
    • RNA Sequencing & Gene expression
      • Gene expression and how we measure it
      • Gene expression quantification and normalization
      • Explorative analysis of gene expression
      • Differential expression analysis with DESeq2
      • Functional enrichment analysis
    • Single-cell Sequencing and Data Analysis
      • scRNA-seq Data Analysis Workflow
      • scRNA-seq Data Visualization Methods
  • FINAL REMARKS
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  • Interphase
  • Mitosis and cytokinesis

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  1. MOLECULAR BIOLOGY

Cell Cycle and Cell Division

PreviousGene Expression: TranslationNextQuiz 6

Last updated 10 months ago

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The cell cycle is a sequence of events occurring within a cell encompassing growth, development, and division. It consists of two primary phases:

  1. Interphase: the cell grows, performs DNA replication and prepares for the division.

  2. Mitotic (M) phase involves the separation of the cell's genetic material and cytoplasm to produce two daughter cells.

Interphase

Interphase is further divided into three sub-phases:

  1. G1 (Gap 1) phase: the cell grows, increases the number of organelles, and synthesises proteins.

  2. S (Synthesis) phase: DNA replication occurs, resulting in the duplication of the genetic material.

  3. G2 (Gap 2) phase: the cell performs additional protein synthesis and growth which prepares it for mitosis.

Many cells of a multicellular organism quit the replicative cell cycle and after the G1 phase switch to a non-proliferative G0 phase.

Mitosis and cytokinesis

After DNA replication, each chromosome consists of two chromatids containing identical copies of the chromosome's DNA. During mitosis chromosomes are split and the chromatids are directed to the opposite poles of the cell.

In animal cells, mitosis is facilitated by organelles called centrosomes which serve as microtubule-organising centres. Microtubules are filaments that consist of multiple protein subunits and can move chromosomes.

The microtubules of the so-called mitotic spindle extend from the centrosomes and attach to regions of the chromosomes called centromeres. The attachment occurs via protein complexes called kinetochores, which assemble at the centromeres.

As the mitotic spindle forms and microtubules attach to kinetochores, they exert forces on the chromosomes, pulling the chromatids apart and guiding their movement to opposite poles of the cell. This ensures that each daughter cell receives an identical set of chromosomes during cell division.

Mitosis includes five stages: prophase, prometaphase, metaphase, anaphase and telophase. Cytokinesis is the process of cytoplasm division which usually starts in the late telophase.

The cell cycle Image source: CNX OpenStax - http://cnx.org/contents/GFy_h8cu@10.53:rZudN6XP@2/Introduction, CC BY 4.0, https://commons.wikimedia.org/w/index.php?curid=49926267
Stages of mitosis and cytokinesis Image source: OpenStax - https://cnx.org/contents/FPtK1zmh@8.25:fEI3C8Ot@10/Preface, CC BY 4.0, https://commons.wikimedia.org/w/index.php?curid=30131217